It got mixed, or it corroded
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Headstamps got mixed
Two makers of the same calibre in one jar. Case capacities differ, so a load worked up for one is a different load in the other, and sorting them is a hand job.
Firing counts got lost
Once-fired and five-times-fired brass in the same container. Brass work hardens and eventually splits, and the count is the only warning.
Bullet weights got mixed
A 150 and a 168 grain look similar in a jar and shoot to different points. Weighing them apart is the only route back.
Gas checks vanished
Small light copper cups in a jar sized for brass, hiding under everything. The smallest containers on the shelf exist for parts like these.
Brass tarnished
An unlined jar in a damp garage over a winter. Tarnish is cosmetic until it is not, and a liner costs almost nothing.
Cast bullet lube migrated
Warm storage and a container that let it spread. Then it is on the next thing in the tray and on the hands that reach in.
Case lube got inside a case mouth
Which is a contamination problem rather than a tidiness one. Lube and open components on the same bench, in the same session.
The solvent degraded its container
An ammonia-bearing copper solvent in the wrong plastic. 56 glass containers here and 78 PP are the two answers.
Labelled by colour
Which fails for around one in twelve men and fails for everybody under a garage light. Numbers on the body of the container.
The fix is thirty numbered jars with liners
One size, clear, lined, labelled on the body with calibre, grain and firing count. Dull, and it is the whole of the sorting problem solved.