A container change reopened the process
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Why the container is in the process
Heat penetration depends on the food, its viscosity and particulates, and on the size and shape of the container and the fill weight. A scheduled process is established for a product in a container, as a pair.
So changing the jar is changing the process
A bigger jar takes longer for heat to reach the center. A different shape changes the path. A heavier fill changes it again. None of those is a packaging decision in isolation.
Headspace counts too
Part 113 defines gross headspace as the vertical distance between the product level and the top edge of the container, and net headspace to the inside surface of the lid. Both are specified terms, which tells you how closely this is controlled.
And initial temperature is a critical factor
Defined as the average temperature of the contents of the coldest container at the time the cycle begins, after thorough stirring or shaking of the filled and sealed container. Fill temperature is part of the process, not a convenience.
Which is why a co-packer has a short container list
They have filed processes for specific containers, and adding one means new process establishment work. That is a cost and a lead time, and it is why the container question narrows quickly.
A larger size is not a simple line extension
Going from a 500 mL to a 946 mL jar is a new process establishment, not a bigger order of the same thing. Budget and schedule it as the former.
So settle the container before the process
Which inverts the usual order in this library and is the right order here. Decide the format you will sell, get the process for it, and then do not change it casually.