What you have to register, and with whom
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More registration questions than any other property here, and which apply depends on the two thresholds.
Four possible registrations
FDA food facility registration. A state or local food establishment license. A juice HACCP obligation. And TTB brewer qualification.
The first two apply broadly; the second two depend on what is in the bottle and what it does in it.
Always
FDA food facility registration, for a facility manufacturing food for consumption in the United States, renewed biennially. A retail establishment is treated differently, which is worth confirming for your own operation.
A state or local food establishment license, with inspection and frequently a plan review.
Business registration and sales tax, as anywhere.
And preventive controls obligations under the FDA food safety framework, which for a beverage facility is a real requirement rather than a formality.
If there is juice in it
The juice HACCP question. A retail establishment selling only direct to consumers is exempt from the rule and still carries the warning statement on untreated juice.
Anything else is a processor: a HACCP plan, a validated 5-log step, monitoring, records, and trained personnel.
Note that this is an obligation rather than a registration. Nobody issues you a HACCP license; you are expected to have the system and to be able to show it.
If it ferments past the line
TTB, and it is a different order of magnitude.
Premises qualified under the Internal Revenue Code, brewer qualification under 27 CFR part 25, a formula filed before production, excise tax, and the ABLA health warning on the container.
Plus state alcohol licensing on top, which is separate and frequently harder.
Which is why the measurement on warm retained samples is not an optional quality check. It is what tells you which of these lists you are on.